Publications

For a full list of publications: Google Scholar

Selected Publications:

CK Cassidy, Z Qin, T Frosio, K Gosink, Z Yang, MSP Sansom, PJ Stansfeld, JS Parkinson, P Zhang, Structure of the Native Chemotaxis Core Signalling Unit from E-protein lysed E. coli cells, MBio, e00793-23, (2023).
L Dietz, CJ Ellison, C Riechmann, CK Cassidy, FD Felfoldi, A Pinto-Fernández, BM Kessler, PR Elliott., Structural basis for SMAC-mediated antagonism of caspase inhibition by the giant ubiquitin ligase BIRC6, Science 379 (6637), 1112-1117, (2023).
R Ouyang, AR Costa, CK Cassidy, A Otwinowska, VCJ Williams, A Latka, PJ Stansfeld, Z Drulis-Kawa, Y Briers, DM Pelt, SJJ Brouns, A Briegel, High-resolution reconstruction of a Jumbo-bacteriophage infecting capsulated bacteria using hyperbranched tail fibers, Nature Communications 13 (1), 7241, (2022).
Y Zhu, CW Koo, CK Cassidy, MC Spink, T Ni, LC Zanetti-Domingues, B Bateman, ML Martin-Fernandez, J Shen, Y Sheng, Y Song, Z Yang, AC Rosenzweig, P Zhang, Structure and activity of particulate methane monooxygenase arrays in methanotrophs, Nature communications 13 (1), 5221, (2022).
W Song, RA Corey, TB Ansell, CK Cassidy, MR Horrell, AL Duncan, PJ Stansfeld, MSP Sansom, PyLipID: A python package for analysis of protein–lipid interactions from molecular dynamics simulations, Journal of chemical theory and computation 18 (2), 1188-1201 (2021).
A Burt, CK Cassidy, P Ames, M Bacia-Verloop, M Baulard, K Huard, Z Luthey-Schulten, A Desfosses, PJ Stansfeld, W Margolin, JS Parkinson, I Gutsche, Complete structure of the chemosensory array core signalling unit in an E. coli minicell strain, Nature communications 11 (1), 743, (2020).
CK Cassidy, BA Himes, D Sun, J Ma, G Zhao, JS Parkinson, PJ Stansfeld, Z Luthey-Schulten, P Zhang, Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations, Communications biology 3 (1), 24, (2020).
W Yang, CK Cassidy, P Ames, CA Diebolder, K Schulten, Z Luthey-Schulten, JS Parkinson, A Briegel, In Situ Conformational Changes of the Escherichia coli Serine Chemoreceptor in Different Signaling States, MBio 10 (4), e00973-19, (2019).
CK Cassidy, BA Himes, FJ Alvarez, J Ma, G Zhao, JR Perilla, K Schulten, P Zhang, CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling, Elife 4, e08419, (2015).
JR Perilla, BC Goh, CK Cassidy, B Liu, RC Bernardi, T Rudack, H Yu, Z Wu, K Schulten, Molecular dynamics simulations of large macromolecular complexes, Current opinion in structural biology 31, 64-74, (2015).

Publications

Selected Publications:

CK Cassidy, Z Qin, T Frosio, K Gosink, Z Yang, MSP Sansom, PJ Stansfeld, JS Parkinson, P Zhang, Structure of the Native Chemotaxis Core Signalling Unit from E-protein lysed E. coli cells, MBio, e00793-23, (2023).

L Dietz, CJ Ellison, C Riechmann, CK Cassidy, FD Felfoldi, A Pinto-Fernández, BM Kessler, PR Elliott., Structural basis for SMAC-mediated antagonism of caspase inhibition by the giant ubiquitin ligase BIRC6, Science 379 (6637), 1112-1117, (2023).

Y Zhu, CW Koo, CK Cassidy, MC Spink, T Ni, LC Zanetti-Domingues, B Bateman, ML Martin-Fernandez, J Shen, Y Sheng, Y Song, Z Yang, AC Rosenzweig, P Zhang, Structure and activity of particulate methane monooxygenase arrays in methanotrophs, Nature communications 13 (1), 5221, (2022).

W Song, RA Corey, TB Ansell, CK Cassidy, MR Horrell, AL Duncan, PJ Stansfeld, MSP Sansom, PyLipID: A python package for analysis of protein–lipid interactions from molecular dynamics simulations, Journal of chemical theory and computation 18 (2), 1188-1201 (2021).

A Burt, CK Cassidy, P Ames, M Bacia-Verloop, M Baulard, K Huard, Z Luthey-Schulten, A Desfosses, PJ Stansfeld, W Margolin, JS Parkinson, I Gutsche, Complete structure of the chemosensory array core signalling unit in an E. coli minicell strain, Nature communications 11 (1), 743, (2020).

CK Cassidy, BA Himes, D Sun, J Ma, G Zhao, JS Parkinson, PJ Stansfeld, Z Luthey-Schulten, P Zhang, Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations, Communications biology 3 (1), 24, (2020).

W Yang, CK Cassidy, P Ames, CA Diebolder, K Schulten, Z Luthey-Schulten, JS Parkinson, A Briegel, In Situ Conformational Changes of the Escherichia coli Serine Chemoreceptor in Different Signaling States, MBio 10 (4), e00973-19, (2019).

CK Cassidy, BA Himes, FJ Alvarez, J Ma, G Zhao, JR Perilla, K Schulten, P Zhang, CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling, Elife 4, e08419, (2015).

JR Perilla, BC Goh, CK Cassidy, B Liu, RC Bernardi, T Rudack, H Yu, Z Wu, K Schulten, Molecular dynamics simulations of large macromolecular complexes, Current opinion in structural biology 31, 64-74, (2015).